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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819581.1_cds_XP_016500112.1_13970
CDS Infomation

[gene=LOC107818588] [db_xref=GeneID:107818588] [protein=protein SHOOT GRAVITROPISM 5-like isoform X2] [protein_id=XP_016500112.1] [location=join(17861..17960,18154..18221,18833..19164,20102..20891)] [gbkey=CDS]
Sequence

ATGTTAAGCAATAACCCGTCTTCTTCGTCCGACCCGTTTACTTCCTCAGAAAATGGAAAC
AATGCTAATAGAAGAAAAAGAAGACCCGCAGGAACCCCAGATCCGGATGCAGAAGTGGTA
TCACTCTCACCAAAAACATTACTAGAATCGGATCGATACGTATGCGAGATCTGTAACCAA
GGATTTCAAAGGGACCAAAACTTACAGATGCACAGAAGAAGGCATAAGGTGCCATGGAAA
TTGCTCAAAAGAGAAACCCCAATTGTTAGAAAGCGCGTTTTCGTATGCCCAGAACCCACT
TGTCTTCACCACGATCCTTGTCATGCTTTAGGCGATCTCGTCGGTATTAAAAAGCATTTC
CGCAGAAAACACAGCAATCACAAACAATGGGTCTGTGAAAAATGCTCAAAAGGATATGCT
GTTCAGTCTGATTACAAAGCTCATCTTAAAACTTGTGGCACTCGTGGTCATTCTTGTGAT
TGTGGTCGCGTTTTCTCAAGGGTGGAGAGCTTCATTGAACACCAAGATGCTTGTAGCATG
GGAAGGCTCCGATCAGAATCACAATCTTTACATCCATCTAATTGTCTTTCTCGCACAGCT
TCAAGTCCTAGCCCCTCAAGTGACACAAATCTCAGCACAACACCATGGCCTACTACTTTG
CTCAAAAATTTGTCGTCGTCGACCACGGCTACTCATCATGTTAATCCAAACATAATCAAG
AATTCCACAAAGCAACGACACAATTTAGAGCTCCAGCTCTTGACTACTACTACATCTTCA
TCTAGCCCGTTTGATGTCTCCGTATCGTCTAAACCAAACGAAGATCACTCAACTTATAAT
CTCCAACTCTCCATTGGCTCCTCAGATTTCAGCGAGAGAAACGAATCCTCAGAAAATGCT
ACATTGGATGCTTTAAAGCTTAAAGATGAAGCGAGGGAGCAGTTAAGACTAGCGATGGCG
GAAAAAGCATATGCTGAAGAAGCAAGGCAGCAAGCGAAGAGGCAAATTGAGTTAGCCGAG
CAGGAATTTGCGAGTGCTAAGAGAATTAGGCAACAAGCACAAGCGGAGTTAAACAAGGCT
AATGCTTTGAAACAACAAGCCATCAAGCAAATTAACTCGACTCTTTCGCAAATAACTTGC
CATTCTTGCAAACAGAAGTTTCAAGCTTCTCTTTCAGATGAGAATAATTCGATGACGTTG
AGTTATATTTCTTCGGCTTTAACAGAAGGTCAGCATGAAGTTGCCAAGAATATCAACCAT
ACCAATCATCTCAAATTTTCTCAACGTTAG

Peptide Sequence

PEP ID

XP_016500112.1
PEP Infomation

PREDICTED: protein SHOOT GRAVITROPISM 5-like isoform X2 [Nicotiana tabacum]
Sequence

MLSNNPSSSSDPFTSSENGNNANRRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ
GFQRDQNLQMHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHF
RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACSM
GRLRSESQSLHPSNCLSRTASSPSPSSDTNLSTTPWPTTLLKNLSSSTTATHHVNPNIIK
NSTKQRHNLELQLLTTTTSSSSPFDVSVSSKPNEDHSTYNLQLSIGSSDFSERNESSENA
TLDALKLKDEAREQLRLAMAEKAYAEEARQQAKRQIELAEQEFASAKRIRQQAQAELNKA
NALKQQAIKQINSTLSQITCHSCKQKFQASLSDENNSMTLSYISSALTEGQHEVAKNINH
TNHLKFSQR

Transcript Sequence

Gene sequence data has not been registered.